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No-coding
Bioinformatics
Academy
For molecular biologists and clinical researchers
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How to find tissue-specific transcription factor (TF) target genes
Q&A: Coffee break with TRANSFAC
In this webinar Prof. Dr. Alexander Kel will share with you the latest intriguing insights of gene regulation mechanisms. He will demonstrate how to perform tissue-specific gene regulation analysis and find enriched motifs using the TRANSFAC database and its MATCH Suite tool. The following main questions will be in the focus of this seminar:
- How to find tissue-specific TF target genes?
- Why do you need TF binding sites?
- Conserved TF binding sites – how important are they?
- PWMs – is that all? What else?
Schedule
Download TRANSFAC and do whatever you like
Software demo: Coffee break with TRANSFAC
This webseminar will give a brief overview of TRANSFAC® with the focus on the flat file download release. In the TRANSFAC® flat file download, the Match™ tool can be used in the command line or the PWMs can be used with third-party tools or with tools of the user. The following main questions will be in the focus of this seminar:
- Factor-site binding
- Factor-factor interaction
- Combinatorial gene regulation
- Gene regulatory networks
- Promoters & Enhancers
- Factor classification
- TF-binding motifs (PWMs)
- TF-binding site prediction
Schedule
Key benefits
No-coding bioinformatics
Perform cutting edge bioinformatics analysis in a user-friendly interface with no programming skills needed
Multi-omics
Learn how to process and integrate various omics data types in your analysis
Promoter analysis
Become the gene regulation expert with deep understanding of transcription factors interplay in various conditions
Pathway analysis
Discover the master regulators governing the studied biological processes through intracellular signaling pathways
Disease molecular mechanisms
Identify prospective biomarkers and drug targets for the pathologies of your interest by performing integrated promoter and pathway analysis
Gold standard tools and databases
Learn how to use the best-in-class knowledge bases on genes, proteins, transcription factors, pathways, drugs, and their targets, together with integrated tools
Testimonials
Coming soon
Promoter hunting with TRANSFAC
Hands-on training
Paid course, €299 per seat before VAT. Date and time will be announced soon.
In this course we will learn how to apply TRANSFAC and study promoters and enhancers.
The following questions will be covered:
My way from promoters to pathways
Paid course, €299 per seat before VAT. Date and time will be announced soon.
In this course we will:
Our lecturers
