TRANSFAC Basic

A comprehensive solution for gene regulation analysis

The basic version of TRANSFAC includes the core functionality of this renowned manually curated database of eukaryotic transcription factors, their genomic binding sites and DNA-binding profiles.

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Predict transcription factor binding sites and their combinations on a genomic scale
using the biggest collection of positional weight matrices (over 10,000) with in-built Machine Learning and Artificial Intelligence methods.

Access the biggest knowledge base on transcription factors
their experimentally characterized binding sites and ChIP experiments, as well as genes regulated by them, their promoters, enhancers and silencers.

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Enjoy the full range of promoter analysis tools
from customized analysis pipelines intended for core bioinformaticians to fully automatized no-coding solutions for bench biologists and biomedical researchers.

Perform your multi-omics data analysis in the geneXplain platform
integrated with TRANSFAC subscription (flexible workspace sizes are available).

What you will get

  • A comprehensive solution for gene regulation analysis covering more than 300 species, with a focus on human, mouse, rat, drosophila, zebrafish, yeast, and plants.
  • Access to the unique MATCH Suite tool for identification of transcription factors regulating the human gene(s) of your interest in the specified conditions.
  • Interactive search engine providing access to world’s largest manually curated encyclopedia of transcriptional regulation.

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