Choose your TRANSFAC package

Maximize your potential with the gold standard of transcriptional regulation

TRANSFAC Download

TRANSFAC download

€ 2960

/annually

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  • TRANSFAC flat files (.dat) (factor, matrix, site, gene, enhancer, cell, class, classification, reference, fragment)
  • JSON format (factor, matrix, site, gene)
  • Import into a PostgreSQL database
  • Command line tools (Java) for TF-binding site prediction (Match Library) in DNA sequences (FASTA)
  • Use of PWMs with compatible third-party tools or with your own tools

TRANSFAC Local installation

Started from € 25000

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  • TRANSFAC BASIC + PATHWAYS + DISEASES 
  • TRANSFAC Download
  • Web GUI
  • In-house secure server
  • SQL access to the DB schema
  • Unlimited space
  • Unlimited users

TRANSFAC Basic

A comprehensive solution for gene regulation analysis

Discover TF binding sites in promoters and enhancers of your genes.

BUY TRANSFAC Basic

Predict transcription factor binding sites and their combinations on a genomic scale
using the biggest collection of positional weight matrices (over 10,000) with in-built Machine Learning and Artificial Intelligence methods.

Access the biggest knowledge base on transcription factors
their experimentally characterized binding sites and ChIP experiments, as well as genes regulated by them, their promoters, enhancers and silencers.

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Enjoy the full range of promoter analysis tools
from customized analysis pipelines intended for core bioinformaticians to fully automatized no-coding solutions for bench biologists and biomedical researchers.

Perform your multi-omics data analysis in the geneXplain platform
integrated with TRANSFAC subscription (flexible workspace sizes are available).

What you will get

  • A comprehensive solution for gene regulation analysis covering more than 300 species, with a focus on human, mouse, rat, drosophila, zebrafish, yeast, and plants.
  • Access to the unique MATCH Suite tool for identification of transcription factors regulating the human gene(s) of your interest in the specified conditions.
  • Interactive search engine providing access to world’s largest manually curated encyclopedia of transcriptional regulation.
BUY TRANSFAC Basic

TRANSFAC Pathways

A comprehensive knowledge base on signal transduction and metabolic pathways

Reconstruct signal transduction network controlling your genes.

BUY TRANSFAC Pathways

Predict potential pathways targeting the genes of your interest.

Build customized regulatory and metabolic networks
with more than one million reactions extracted from original scientific literature and evaluated by experts.

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Apply integrated pathway visualization and modification tool

Perform Upstream analysis
integrated promoter and pathway analysis for identification of prospective drug targets and biomarkers (available within the geneXplain platform integrated with TRANSFAC pathways subscription).

What you will get

  • A comprehensive knowledge base on signal transduction and metabolic pathways, individual reactions with experimental details, protein-protein interactions and post-translational modifications.
  • Access to Gene-Disease-Drug-Clinical Trial assignments, disease biomarkers, drug targets, drug-disease approval status, and functional classification tools.
  • Upstream Analysis – integrated promoter and pathway analysis.
BUY TRANSFAC Pathways

TRANSFAC Diseases

Treatments for Complex Clinical Cases with Pathology Unresponsive to Conventional Therapies

Identify drug targets and disease biomarkers.

BUY TRANSFAC Diseases

Automatically process multi-omics raw patient data and identify prospective drug targets and treatments predicted to be effective for the studied clinical case.

Full reconstruction of disease molecular mechanisms
based on the integrated promoter and pathway analysis.

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No bioinformatics skills needed
run complicated omics data processing pipelines from just several clicks in a user-friendly interface.

What you will get

  • Deep understanding of molecular mechanisms underlying the studied pathology.
  • Prospective treatments suggestions covering both: known and repurposed drugs for the studied pathology in complicated clinical cases where no conventional therapies are effective.
  • Automatically generated comprehensive report fully explaining the performed analysis and the obtained results.
  • Molecular Tumor Board report based on patient’s genomics data supported for a number of neoplasm diseases.
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