Choose your TRANSFAC package

Maximize your potential with the gold standard of transcriptional regulation

TRANSFAC SaaS

Transfac
basic

€ 450/month
or
€3200/year

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  • >10,000 PWMs 
  • >1M TF Sites 
  • >200 pipelines  
  • Motif search
  • Site combinations
  • Promoters/Enhancers 
  • Easy GUI 
  • 100GB Cloud Storage 
  • AI and ML
  • API 
  • >1,500 Pathways
  • >1.2M Reactions
  • Master-regulators
  • Upstream analysis
  • SBGN viewer 
  • ODE visual modeling
  • >140,000 Biomarkers 
  • >10,000 Drugs
  • > 55,000 Targets 
  • >1,1M Clinical Trial – Disease links 
  • Drug repurposing 
  • Multi-omics integration 
  • One-click solution
  • Disease mechanism discovery report

Bonus

1 hour of TRANSFAC set up and consultation ($200 value)

Transfac Pathways

€ 500/month
or
€3500/year

Buy Now


  • >10,000 PWMs 
  • >1M TF Sites 
  • >200 pipelines  
  • Motif search
  • Site combinations
  • Promoters/Enhancers 
  • Easy GUI 
  • 100GB Cloud Storage 
  • AI and ML
  • API 
  • >1,500 Pathways
  • >1.2M Reactions
  • Master-regulators
  • Upstream analysis
  • SBGN viewer 
  • ODE visual modeling
  • >140,000 Biomarkers 
  • >10,000 Drugs
  • > 55,000 Targets 
  • >1,1M Clinical Trial – Disease links 
  • Drug repurposing 
  • Multi-omics integration 
  • One-click solution
  • Disease mechanism discovery report

Bonus

2 hour of TRANSFAC set up and consultation ($400 value)

Most popular

TRANSFAC Diseases

€ 550/month
or
€3900/year

Buy Now


  • >10,000 PWMs 
  • >1M TF Sites 
  • >200 pipelines  
  • Motif search
  • Site combinations
  • Promoters/Enhancers 
  • Easy GUI 
  • 100GB Cloud Storage 
  • AI and ML
  • API 
  • >1,500 Pathways
  • >1.2M Reactions
  • Master-regulators
  • Upstream analysis
  • SBGN viewer 
  • ODE visual modeling
  • >140,000 Biomarkers 
  • >10,000 Drugs
  • > 55,000 Targets 
  • >1,1M Clinical Trial – Disease links 
  • Drug repurposing 
  • Multi-omics integration 
  • One-click solution
  • Disease mechanism discovery report

Bonus 1

3 hour of TRANSFAC set up and consultation ($600 value)

Bonus 2

30% discount on our hourly consulting rate while the subscription is active

TRANSFAC custom

Started
from
€12000/year

Contact us


Contact us to craft a plan tailored to your needs. Plan might include:

  • ⁠Anything from other TRANSFAC plans
  • Hands-on training for your entire lab
  • Personal research coach
  • Tailor-made pipelines for your data type
  • Data analysis service
  • Promoter design projects
  • Analysis of MOA of drugs
  • Analysis of new genomes
  • Any other services you require
  • Anything from other TRANSFAC plans – Gain access to a wide range of resources tailored to enhance your research capabilities and drive innovation.
  • Hands-on training for your entire lab – Equip your team with practical skills and knowledge, ensuring they are proficient in using the tools necessary for successful experiments.
  • Personal research coach – Receive tailored guidance and support to optimize your research strategies and overcome specific challenges.
  • Tailor-made pipelines for your data type – Streamline your data processing with customized workflows that improve efficiency and accuracy, saving you time and resources.
  • Data analysis services – Benefit from expert analysis that provides actionable insights, helping you make informed decisions based on your research data.
  • Promoter design projects – Design effective promoters that enhance gene expression, leading to more successful experimental outcomes.
  • Analysis of the mechanism of action (MOA) of drugs – Understand how drugs interact at a molecular level, enabling you to develop better therapeutic strategies and improve treatment efficacy.
  • Analysis of new genomes – Unlock the potential of new genomic data, facilitating discoveries that can lead to advancements in personalized medicine and genetic research.
  • And anything else you may need – Enjoy a comprehensive support system tailored to your unique requirements, ensuring that all aspects of your research are covered.

TRANSFAC Download

TRANSFAC download

€ 2960

/annually

Buy now


  • TRANSFAC flat files (.dat) (factor, matrix, site, gene, enhancer, cell, class, classification, reference, fragment)
  • JSON format (factor, matrix, site, gene)
  • Import into a PostgreSQL database
  • Command line tools (Java) for TF-binding site prediction (Match Library) in DNA sequences (FASTA)
  • Use of PWMs with compatible third-party tools or with your own tools

TRANSFAC Local installation

Started from € 25000

Request price


  • TRANSFAC BASIC + PATHWAYS + DISEASES 
  • TRANSFAC Download
  • Web GUI
  • In-house secure server
  • SQL access to the DB schema
  • Unlimited space
  • Unlimited users

TRANSFAC Basic

A comprehensive solution for gene regulation analysis

The basic version of TRANSFAC includes the core functionality of this renowned manually curated database of eukaryotic transcription factors, their genomic binding sites and DNA-binding profiles.

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Predict transcription factor binding sites and their combinations on a genomic scale
using the biggest collection of positional weight matrices (over 10,000) with in-built Machine Learning and Artificial Intelligence methods.

Access the biggest knowledge base on transcription factors
their experimentally characterized binding sites and ChIP experiments, as well as genes regulated by them, their promoters, enhancers and silencers.

Enjoy the full range of promoter analysis tools
from customized analysis pipelines intended for core bioinformaticians to fully automatized no-coding solutions for bench biologists and biomedical researchers.

Perform your multi-omics data analysis in the geneXplain platform
integrated with TRANSFAC subscription (flexible workspace sizes are available).

What you will get

  • A comprehensive solution for gene regulation analysis covering more than 300 species, with a focus on human, mouse, rat, drosophila, zebrafish, yeast, and plants.
  • Access to the unique MATCH Suite tool for identification of transcription factors regulating the human gene(s) of your interest in the specified conditions.
  • Interactive search engine providing access to world’s largest manually curated encyclopedia of transcriptional regulation.

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TRANSFAC Pathways

A comprehensive knowledge base on signal transduction and metabolic pathways

TRANSFAC pathways fully includes all features of TRANSFAC basic together with a variety of advantageous functions brought by the TRANSPATH database of mammalian signal transduction and metabolic pathways and HumanPSD database of gene-drug-disease assignments.

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Predict potential pathways targeting the genes of your interest.

Build customized regulatory and metabolic networks
with more than one million reactions extracted from original scientific literature and evaluated by experts.

Apply integrated pathway visualization and modification tool

Perform Upstream analysis
integrated promoter and pathway analysis for identification of prospective drug targets and biomarkers (available within the geneXplain platform integrated with TRANSFAC pathways subscription).

What you will get

  • A comprehensive knowledge base on signal transduction and metabolic pathways, individual reactions with experimental details, protein-protein interactions and post-translational modifications.
  • Access to Gene-Disease-Drug-Clinical Trial assignments, disease biomarkers, drug targets, drug-disease approval status, and functional classification tools.
  • Upstream Analysis – integrated promoter and pathway analysis.

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TRANSFAC Diseases

Treatments for Complex Clinical Cases with Pathology Unresponsive to Conventional Therapies

TRANSFAC diseases fully includes all features of TRANSFAC pathways, but in addition to that it provides access to the unique Genome Enhancer pipeline for identification of prospective drug targets and associated treatments based on the patient multi-omics data analysis.

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Automatically process multi-omics raw patient data and identify prospective drug targets and treatments predicted to be effective for the studied clinical case.

Full reconstruction of disease molecular mechanisms
based on the integrated promoter and pathway analysis.

No bioinformatics skills needed
run complicated omics data processing pipelines from just several clicks in a user-friendly interface.

What you will get

  • Deep understanding of molecular mechanisms underlying the studied pathology.
  • Prospective treatments suggestions covering both: known and repurposed drugs for the studied pathology in complicated clinical cases where no conventional therapies are effective.
  • Automatically generated comprehensive report fully explaining the performed analysis and the obtained results.
  • Molecular Tumor Board report based on patient’s genomics data supported for a number of neoplasm diseases.

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